Transcriptome Comparison Reveals Key Candidate Genes Responsible for the Unusual Reblooming Trait in Tree Peonies
Identifieur interne : 000C84 ( Main/Exploration ); précédent : 000C83; suivant : 000C85Transcriptome Comparison Reveals Key Candidate Genes Responsible for the Unusual Reblooming Trait in Tree Peonies
Auteurs : Hua Zhou [République populaire de Chine] ; Fang-Yun Cheng [République populaire de Chine] ; Rong Wang [République populaire de Chine] ; Yuan Zhong [République populaire de Chine] ; Chaoying He [République populaire de Chine]Source :
- PLoS ONE [ 1932-6203 ] ; 2013.
Abstract
Tree peonies are important ornamental plants worldwide, but growing them can be frustrating due to their short and concentrated flowering period. Certain cultivars exhibit a reblooming trait that provides a valuable alternative for extending the flowering period. However, the genetic control of reblooming in tree peonies is not well understood. In this study, we compared the molecular properties and morphology of reblooming and non-reblooming tree peonies during the floral initiation and developmental processes. Using transcriptome sequencing technology, we generated 59,275 and 63,962 unigenes with a mean size of 698 bp and 699 bp from the two types of tree peonies, respectively, and identified eight differentially expressed genes that are involved in the floral pathways of
Url:
DOI: 10.1371/journal.pone.0079996
PubMed: 24244590
PubMed Central: 3828231
Affiliations:
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Wang</name><affiliation wicri:level="3"><nlm:aff id="aff1"><addr-line>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Zhong, Yuan" sort="Zhong, Yuan" uniqKey="Zhong Y" first="Yuan" last="Zhong">Yuan Zhong</name><affiliation wicri:level="3"><nlm:aff id="aff1"><addr-line>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower 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University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation><affiliation wicri:level="3"><nlm:aff id="aff2"><addr-line>Institute of Biology and Resources, Jiangxi Academy of Sciences, Nanchang, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Institute of Biology and Resources, Jiangxi Academy of Sciences, Nanchang</wicri:regionArea><placeName><settlement type="city">Nanchang</settlement><region type="province">Jiangxi</region></placeName></affiliation></author><author><name sortKey="Cheng, Fang Yun" sort="Cheng, Fang Yun" uniqKey="Cheng F" first="Fang-Yun" last="Cheng">Fang-Yun Cheng</name><affiliation wicri:level="3"><nlm:aff id="aff1"><addr-line>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Wang, Rong" sort="Wang, Rong" uniqKey="Wang R" first="Rong" last="Wang">Rong Wang</name><affiliation wicri:level="3"><nlm:aff id="aff1"><addr-line>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Zhong, Yuan" sort="Zhong, Yuan" uniqKey="Zhong Y" first="Yuan" last="Zhong">Yuan Zhong</name><affiliation wicri:level="3"><nlm:aff id="aff1"><addr-line>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Landscape Architecture College of Beijing Forestry University, National Flower Engineering Research Center, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="He, Chaoying" sort="He, Chaoying" uniqKey="He C" first="Chaoying" last="He">Chaoying He</name><affiliation wicri:level="3"><nlm:aff id="aff3"><addr-line>State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China</addr-line></nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author></analytic><series><title level="j">PLoS ONE</title><idno type="eISSN">1932-6203</idno><imprint><date when="2013">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Tree peonies are important ornamental plants worldwide, but growing them can be frustrating due to their short and concentrated flowering period. Certain cultivars exhibit a reblooming trait that provides a valuable alternative for extending the flowering period. However, the genetic control of reblooming in tree peonies is not well understood. In this study, we compared the molecular properties and morphology of reblooming and non-reblooming tree peonies during the floral initiation and developmental processes. Using transcriptome sequencing technology, we generated 59,275 and 63,962 unigenes with a mean size of 698 bp and 699 bp from the two types of tree peonies, respectively, and identified eight differentially expressed genes that are involved in the floral pathways of <italic>Arabidopsis thaliana</italic>. These differentially regulated genes were verified through a detailed analysis of their expression pattern during the floral process by real time RT-PCR. From this combined analysis, we identified four genes, <italic>PsFT</italic>, <italic>PsVIN3</italic>, <italic>PsCO</italic> and <italic>PsGA20OX</italic>, which likely play important roles in the regulation of the reblooming process in tree peonies. These data constitute a valuable resource for the discovery of genes involved in flowering time and insights into the molecular mechanism of flowering to further accelerate the breeding of tree peonies and other perennial woody plants.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Cheng, Fy" uniqKey="Cheng F">FY Cheng</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Ren, Xl" uniqKey="Ren X">XL Ren</name></author><author><name sortKey="Li, Hf" uniqKey="Li H">HF Li</name></author><author><name sortKey="Gong, Dq" uniqKey="Gong D">DQ Gong</name></author><author><name sortKey="Zhang, Sy" uniqKey="Zhang S">SY Zhang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Jiang, Z" uniqKey="Jiang Z">Z Jiang</name></author><author><name sortKey="Liu, 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Chine</li></country><region><li>Jiangxi</li></region><settlement><li>Nanchang</li><li>Pékin</li></settlement></list><tree><country name="République populaire de Chine"><noRegion><name sortKey="Zhou, Hua" sort="Zhou, Hua" uniqKey="Zhou H" first="Hua" last="Zhou">Hua Zhou</name></noRegion><name sortKey="Cheng, Fang Yun" sort="Cheng, Fang Yun" uniqKey="Cheng F" first="Fang-Yun" last="Cheng">Fang-Yun Cheng</name><name sortKey="He, Chaoying" sort="He, Chaoying" uniqKey="He C" first="Chaoying" last="He">Chaoying He</name><name sortKey="Wang, Rong" sort="Wang, Rong" uniqKey="Wang R" first="Rong" last="Wang">Rong Wang</name><name sortKey="Zhong, Yuan" sort="Zhong, Yuan" uniqKey="Zhong Y" first="Yuan" last="Zhong">Yuan Zhong</name><name sortKey="Zhou, Hua" sort="Zhou, Hua" uniqKey="Zhou H" first="Hua" last="Zhou">Hua Zhou</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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